October 20, 2018

Publications acknowledging WheatCAP support

Our Google Scholar profile  shows the list of WheatCAP publications, how they are being cited and the overall citation indices. 

2017 (60 publications, 318 cross citations in first two years) [get this list as a PDF file

  1. Addison, C.K., R.E. Mason, G. Brown-Guedira, M. Guedira, Y. Hao, D.L Lozada, A.M. Acuna, N.A. Arguello, N. Subramanian, J. Johnson, A.M.H. Ibrahim, R. Sutton, S.A. Harrison. QTL and major genes associated with grain yield in soft red winter wheat adapted to the southern United States. Euphytica. 209: 665-677. doi:10.1007/s10681-016-1650-1
  2. Arruda, M.P., P. Brown, G. Brown-Guedira, A.M. Krill, C. Thurber, K.R. Merrill, B.J. Foresman, F.L. Kolb. 2016.  Genome-wide association mapping of Fusarium head blight resistance in wheat using genotyping-by-sequencing. Plant Genome 9(1) doi:10.3835/plantgenome2015.04.0028
  3. Assanga, S.O., M. Fuentealba, G. Zhang, C. Tan, S. Dhakal, J.C. Rudd, A.M.H. Ibrahim, Q Xue, S.D. Haley, J. Chen, S. Chao, J. Baker, K. Jessup, S.Y. Liu. 2017. Mapping of quantitative trait loci for grain yield and its components in a US popular winter wheat TAM 111 using 90K SNPs. PLOS ONE 12: e0189669 doi:10.1371/journal.pone.0189669
  4. Assanga, S.O., G. Zhang, C.-T. Tan, , J.C. Rudd, Ibrahim, Q. Xue, S. Chao, M.P. Fuentealba, S.Y. Liu. 2016. Saturated genetic map of wheat streak mosaic virus resistance gene wsm2 in wheat. Crop Sci. 57:332-339. doi:10.2135/cropsci2016.04.0233
  5. Babiker, E.M., T.C. Gordon, S. Chao, M.N. Rouse, R. Wanyera, M. Newcomb, G. Brown-Guedira, Z.A. Pretorius, J.M. Bonman. 2016. Genetic mapping of resistance to the Ug99 race group of Puccinia graminis f. sp. tritici in a spring wheat landrace CItr 4311. Theor Appl Genet 2016:1-10. doi: 1007/s00122-016-2764-5
  6. Babiker, E.M., T.C. Gordon, S. Chao, M.N. Rouse, R. Wanyera, M. Acevedo, G. Brown-Guedira, M. Bonman. 2016. Molecular mapping of stem rust resistance loci effective against the Ug99 race group of the stem rust pathogen and validation of a single nucleotide polymorphism marker linked to stem rust resistance gene Sr28. Phytopathology 107:208-215. doi:10.1094/PHYTO-08-16-0294-R
  7. Babiker, E.M., T.C. Gordon, J.M. Bonman, S. Chao, M.N. Rouse, G. Brown-Guedira, S. Williamson, Z.A. Pretorius. Rapid identification of resistance loci effective against Puccinia graminis f. sp. tritici race TTKSK in 33 spring wheat landraces. Plant Dis. 1002: 331-336. doi:10.1094/PDIS-04-15-0466-RE
  8. Carter A.H., S.S. Jones, K.A. Balow, G.B. Shelton, A. Burke, S.R. Lyon, R.W. Higginbotham, X.M. Chen, D.A. Engle, T.D. Murray, C.F. Morris. Registration of ‘Jasper’ soft white winter wheat. J. Plant Reg. doi:10.3198/jpr2016.09.0051crc
  9. Carter A.H., S.S. Jones, S.R. Lyon, K.A. Balow, G.B. Shelton, A. Burke, R.W. Higginbotham, X.M. Chen, D.A. Engle, C.F. Morris. 2017. Registration of ‘Sequoia’ hard red winter wheat. Journal of Plant Registrations doi:10.3198/jpr2016.09.0052crc
  10. Carter A.H., K.K. Kidwell, A. Burke, G.B. Shelton, R.W. Higginbotham, V. DeMacon, M.J. Lewien, X.M. Chen, D.A. Engle, C.F. Morris. 2017. Registration of ‘Earl’ hard white winter wheat. Journal of Plant Registrations 11:275-280. doi:10.3198/jpr2016.09.0054
  11. Cai J., S. Wang, T Li, G. Bai. 2016. Multiple minor QTLs are responsible for Fusarium head blight resistance in Chinese wheat landrace Haiyanzhong. PloS ONE 11:e0163292. doi:10.1371/journal.pone.0163292
  12. Chao, S., M.N. Rouse, M. Acevedo, A. Szabo-Hever, H. Bockelman, J.M. Bonman, E. Elias, D. Klindworth, and S. Xu. 2017. Evaluation of genetic diversity and host resistance to stem rust in USDA NSGC durum wheat accessions. Plant Genome 10. doi:10.3835/plantgenome2016.07.0071
  13. Chen, J., M. J. Guttieri, J. Zhang, D. Hole, E. Souza, B. Goates. 2016. A novel QTL associated with dwarf bunt resistance in Idaho 444 winter wheat. Theor Appl Genet. 129: 2313-2322. doi:10.18637/jss.v067.i01
  14. Chen, J., J. Wheeler, N. Klassen, W. Zhao, K. O’Brien, C. Jackson, J. M. Marshall, X.M. Chen. 2017. Release of ‘UI Sparrow’ soft white winter wheat. Journal of Plant Registration, 12:79-84. doi:10.3198/jpr2017.04.0021crc
  15. Cook, J. P., N. K. Blake, H. Y. Heo, J. M. Martin, D. K. Weaver, and L. E. Talbert. 2017. Phenotypic and haplotype diversity among tetraploid and hexaploid wheat accessions with potentially novel insect resistance genes for wheat stem sawfly. Plant Genome 10. doi:10.3835/plantgenome2016.03.0026
  16. Dong, Z, J. Zhang, J. M. Hegarty, W. Zhang, S. Chao, X. Chen, Y. Zhou, and J. Dubcovsky. 2017. Validation and characterization of a QTL for adult plant resistance to stripe rust on wheat chromosome arm 6BS (Yr78). Theor. Appl. Genet. 130: 2127–2137. doi:10.1007/s00122-017-2946-9
  17. Fang, T., B.F. Carver, R.M. Hunger, L. Yan. 2017. Mis-spliced Lr34 transcript events in winter wheat. PLoS ONE 12:e0171149. doi:10.1371/journal.pone.0171149
  18. Gao, L., M.N. Rouse, P. Mihalyov, P. Bulli, M. Pumphrey, J.A. Anderson.   Genetic characterization of stem rust resistance in a global spring wheat germplasm collection. Crop Science. 57:1-15. doi:10.2135/cropsci2017.03.0159
  19. Guedira, M., M. Xiong, Y.F. Hao, J. Johnson, S. Harrison, D. Marshall, G. Brown-Guedira. 2016. Heading date QTL in winter wheat (Triticum aestivum) coincide with major developmental genes VERNALIZATION1 and PHOTOPERIOD1. PLoS ONE, 11: e0154242. doi:10.1371/journal.pone.0154242
  20. Guttieri, M.J., K. Frels, T. Regassa, B.M. Waters, P.S. Baenziger. 2017. Variation for nitrogen use efficiency traits in current and historical Great Plains hard winter wheat. Euphytica 213:87. doi:10.1007/s10681-017-1869-5
  21. Haley S.D., J.J. Johnson, F.B. Peairs, J.A. Stromberger, E.E. Hudson-Arns, S.A. Seifert, V.A. Anderson, G. Bai, X. Chen, R.L. Bowden, Y. Jin, J.A. Kolmer, M. Chen, and B.W. Seabourn. 2017. Registration of ‘Sunshine’ Hard White Winter Wheat. J. Plant Reg. doi:10.3198/jpr2016.12.0075crc
  22. Jernigan, K.L., C. F. Morris, R. Zemetra, J. Chen, K. Garland-Campbell, A.H. Carter. 2017. Genetic analysis of soft white wheat end-use quality traits in a club by common wheat cross. J. Cereal Science. 76:148-156. doi:10.1016/j.jcs.2017.06.005
  23. Kidwell, K.K, M. O. Pumphrey, J. S. Kuehner, G. B. Shelton, V. L. DeMacon, S. Rynearson, X. M. Chen, S. O. Guy, D. A. Engle, B.-K. Baik, C. F. Morris, and N. A. Bosque-Pérez. 2018. Registration of ‘Glee” Hard Red Spring Wheat.  Journal of Plant Registrations. 12:60-65. doi:10.3198/jpr2016.04.0022crc
  24. Kissing Kucek, L., E. Dyck, J. Russell, E. Clark, J. Hamelman, S. Burns-Leader, S. Senders, J. Jones, D. Benscher, M. Davis, G. Roth, S. Zwinger, M.E. Sorrells, J.C. Dawson. 2017. Evaluation of wheat and emmer varieties for artisanal baking, pasta making, and sensory quality. J. Cereal Science, 74:19-27. doi:10.1016/j.jcs.2016.12.010
  25. Krasileva, K.V., H. Vasquez-Gross, T. Howell1, P. Bailey, F. Paraiso, L. Clissold, J. Simmonds, R. H. Ramirez-Gonzalez, X. Wang, P. Borrill, C. Fosker, S. Ayling, A. Phillips, C. Uauy, J. Dubcovsky. 2017. Uncovering hidden variation in polyploid wheat. Proc. Natl. Acad. Sci. U.S.A. 114: E913–E921. doi:10.1073/pnas.1619268114
  26. Kruse, E.B., S.W. Carle, N. Wen, D.Z. Skinner, T.D. Murray, K.A. Garland-Campbell, A.H. Carter. 2017. Genomic regions associated with tolerance to freezing stress and snow mold in winter wheat. G3 7: 775-780 Early Online Published January 30, 2017. doi:10.1534/g3.116.037622
  27. Lan, C., I. Lowe Hale, S.A. Herrera-Foessel, B.R. Basnet, M.S. Randhawa, J. Huerta-Espino, J. Dubcovsky and R.P. Singh. 2017. Characterization and mapping of leaf rust and stripe rust resistance loci in hexaploid wheat lines UC1110 and PI610750 under Mexican environments. Frontiers in Plant Science. doi:10.3389/fpls.2017.01450
  28. Liang, X., Y. Liu, J. Chen, and C. Adams. 2017. Late-season photosynthetic rate and senescence were associated with grain yield in winter wheat of diverse origins. J. Agro Crop Sci. doi:10.1111/jac.12231.
  29. Li C-L., G. Bai, B. F. Carver, S. Chao and Z. Wang. 2016. Single nucleotide polymorphisms linked to quantitative trait loci for grain quality traits in wheat. The Crop J. 4:1–11. doi:10.1016/j.cj.2015.10.002
  30. Li, C., Li, C., Carver, B. F., Bowden, R., Su, Z., Wang, Z., Bai, G. 2017. Mapping of Quantitative Trait Loci for Leaf Rust Resistance in the Wheat Population Ning7840 × Clark. Plant Dis.  doi:10.1094/PDIS-12-16-1743-RE
  31. Lin M., D. Zhang, S. Liu, G. Zhang, J. Yu, A. K. F. and G. Bai. Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat. BMC Genomics 17:794. doi:10.1186/s12864-016-3148-6
  32. Liu, Y., J.Zhang, Y. Hu, and J. Chen. 2017. Dwarfing genes Rht4 and Rht-B1b affect plant height, agronomic traits, and kernel quality traits in common wheat under two water regimes. Field Crops Research 204: 242-248. doi:10.1016/j.fcr.2017.01.020
  33. Liu, Y., B.C. Bowman, Y. Hu, X. Liang, W. Zhao, J. Wheeler, N. Klassen, H. Bockelman, J. M. Bonman, J. Chen. 2017. Evaluation of agronomic traits and drought tolerance of winter wheat accessions from the National Small Grain Collection. Agronomy. 7(51) doi:10.3390/agronomy7030051.
  34. Liu, M., L. Lei, C. Powers, Z. Liu, K.G. Campbell, X. Chen, R.L. Bowden, B.F Carver, L. Yan. 2016. TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat. Theoretical and Applied Genetics. 129:345-355. doi:10.1007/s00122-015-2631-9
  35. Liu, N, G. Bai, M. Lin, X.Y. Xu, W.M. Zheng. 2017. Genome-wide association analysis of powdery mildew resistance in U.S. winter wheat. Sci Rep. 7: 11743. doi: 1038/s41598-017-11230-z
  36. Lozada, D.N., R.E. Mason, M.D.A. Babar, B.F. Carver, G. Brown-Guedira, K. Merrill, M.N. Arguello, A. Acuna, L. Vieira, A. Holder, C.K. Addison, D.E. Moon, R.G. Miller, and S. Dreisigacker. 2017. Association mapping reveals loci associated with multiple traits that affect grain yield and adaptation in soft winter wheat. Euphytica. 213:222. doi: 10.1007/s10681-017-2005-2
  37. Lu, Y., Bowden, R. L., Zhang, G., Xu, X., Fritz, A. K., Bai, G.. 2017. Quantitative trait loci for slow-rusting resistance to leaf rust in doubled haploid wheat population CI13227 x Lakin. Phytopathology 107:1372-1380. doi: 1094/PHYTO-09-16-0347-R
  38. Mihalyov, P.D., V.A. Nichols, P. Bulli, M.N. Rouse, M.O. Pumphrey. 2017. Multi-locus mixed model analysis of stem rust resistance in winter wheat. The Plant Genome. 10(2). doi:10.3835/plantgenome2017.01.0001.
  39. Muleta, K.T., M.N. Rouse, S. Rynearson, X. Chen, B. G. Buta, and M.O. Pumphrey.   Characterization of molecular diversity and genome-wide mapping of loci associated with resistance to stripe rust and stem rust in Ethiopian bread wheat accessions.  BMC Plant Biology. 17, 134. doi:10.1186/s12870-017-1082-7
  40. Muleta, K.T., P. Bulli, S. Rynearson, X. Chen, and M. Pumphrey.   Loci Associated with Resistance to Stripe Rust (Puccinia striiformis f. sp. tritici) in a Core Collection of Spring Wheat (Triticum aestivum).  Plos One.  doi: 10.1371/journal.pone.017908
  41. Muleta, K.T., P. Bulli, Z. Zhang, X. Chen, and M. Pumphrey. 2017. Unlocking diversity in germplasm collections by genomic selection: a case study based on quantitative adult plant resistance to stripe rust in spring wheat. The Plant Genome. 10(3) doi:10.3835/plantgenome2016.12.0124
  42. Nirmala, J., J. Saini, M. Newcomb, P. Olivera, S. Gale, D. Klindworth, E. Elias, L. Talbert, S. Chao, J. Faris, S. Xu, Y. Jin, and M.N. Rouse. G3. 7: 3481-3490. doi:10.1534/g3.117.300209
  43. Pour, H.A., M.R. Bihamta, V. Mohammadi, S.A. Peyghambari, G.H. Bai and G.R. Zhang. 2017. Genotyping-by-sequencing (GBS) revealed molecular genetic diversity of Iranian wheat landraces and cultivars. Front. Plant Sci. On line first doi:10.3389/fpls.2017.01293
  44. Schönhofen, A., X. Zhang, and J. Dubcovsky. 2017. Combined mutations in five wheat Starch Branching Enzyme II genes increase resistant starch but affect grain yield and bread-making quality. Journal of Cereal Science 75: 165-174. doi:10.1016/j.jcs.2017.03.028
  45. Shi F., J. Tibbits, R.K. Pasam, P. Kay, D. Wong, J. Petkowski, K.L. Forrest, B.J. Hayes, A. Akhunova, J. Davies, S. Webb, G.C. Spangenberg, E. Akhunov, M.J. Hayden, H.D. Daetwyler. 2017. Exome sequence genotype imputation in globally diverse hexaploid wheat accessions. Theor Appl Genet. 130:1393-1404. doi:10.1007/s00122-017-2895-3
  46. Su Z., S. Jin, Y. Lu, G. Zhang, S. Chao, G. Bai. 2016. Single nucleotide polymorphism tightly linked to a major QTL on chromosome 7A for both kernel length and kernel weight in wheat. Mol Breed. 36:15. doi:10.1007/s11032-016-0436-4
  47. Subramanian, N., R.E. Mason, E.A. Milus, D.E. Moon, G. Brown-Guedira. 2016 Characterization of two adult-plant stripe rust resistance genes on chromosomes 3BS and 4BL in soft red winter wheat. Crop Science doi:10.2135/cropsci2015.01.0043
  48. Tan, C.-T, S.O. Assanga, G. Zhang, J.C. Rudd, S. Haley, Q. Xue, A. Ibrahim, G. Bai, X. Zhang, P. Byrne, M.P. Fuentealba, Y. Liu. 2017. Development and validation of KASP SNP markers for wheat streak mosaic virus resistance gene Wsm2. Crop Sci. 57:340-349. doi:10.2135/cropsci2016.04.0234
  49. Tan, C.-T., H. Yu, Y. Yang, X. Xu, M. Chen, J.C. Rudd, Q. Xue, A. Ibrahim, L. Garza, S. Wang, M.E. Sorrells, S.Y. Liu. 2017. Development and validation of KASP markers for the greenbug resistance gene Gb7 and the Hessian fly resistance gene H32 in wheat. Theor Appl Genet: 1-18. doi:10.1007/s00122-017-2930-4
  50. Turner, M.K., J.A. Kolmer, M.O. Pumphrey, P. Bulli, S. Chao, and J.A. Anderson. 2016. Association mapping of leaf rust resistance loci in a spring wheat core collection. Theor . Appl. Genet. 130:345–361. doi:10.1007/s00122-016-2815-y
  51. Varella, A. C., D. K. Weaver, J. P. Cook, N. K. Blake, M. L. Hofland, P. F. Lamb, L. E. Talbert.   Characterization of resistance to the wheat stem sawfly in spring wheat landrace accessions from targeted geographic regions of the world.  Euphytica 213:153. doi:10.1007/s10681-017-1945-x
  52. Varella, A.; D. Weaver, R. Peterson, J. Sherman, M. Hofland, N. Blake, J. Martin, L. Talbert. 2017.  Host plant quantitative trait loci affect specific sequences in oviposition by a stem-mining insect.  Appl. Genet. 130:187-197. doi:10.1007/s00122-016-2805-0
  53. Uauy, C., B.B.H. Wulff, and J. Dubcovsky. 2017. Combining traditional mutagenesis with new high-throughput sequencing and genome editing to reveal hidden variation in polyploid wheat. Annu. Rev. Genet. 51: 435–454. doi: 1146/annurev-genet-120116-024533
  54. Varella, A. C., D. K. Weaver, J. P. Cook, N. K. Blake, M. L. Hofland, P. F. Lamb, L. E. Talbert.   Characterization of resistance to the wheat stem sawfly in spring wheat landrace accessions from targeted geographic regions of the world.  Euphytica 213:153. doi:10.1007/s10681-017-1945-x
  55. Varella, A.; D. Weaver, R. Peterson, J. Sherman, M. Hofland, N. Blake, J. Martin, L. Talbert. 2017.  Host plant quantitative trait loci affect specific sequences in oviposition by a stem-mining insect.  Appl. Genet. 130:187-197. doi:10.1007/s00122-016-2805-0
  56. Veenstra, L.D., J-L. Jannink, M.E. Sorrells. 2017. Wheat fructans: a potential breeding target for nutritionally improved, climate resilient varieties. Crop Science 57:1624–1640. doi:2135/cropsci2016.11.0955
  57. Wang, R., J. Chen, J. Zhang, W. Zhao, J. Wheeler, N. Klassen, J.A. Anderson, D.R. See and Y. Dong. 2017. Genome-wide association mapping of resistance QTL to fusarium head blight in spring wheat lines grown in Pacific Northwest and CIMMYT. Phytopathology. doi:10.1094/PHYTO-02-17-0073-R
  58. Yu, L-X, S. Chao, R.P. Singh and M.E. Sorrells. 2017. Identification and Validation of Single Nucleotide Polymorphic Markers Linked to Ug99 Stem Rust Resistance in Spring Wheat. PLOS ONE. 12: e0171963. doi: 1371/journal.pone.0171963
  59. Zhang, W., S. Chen, Z. Abate, J. Nirmala, M. Rouse, and J. Dubcovsky. 2017. Identification and characterization of Sr13, a tetraploid wheat gene that confers resistance to the Ug99 stem rust race group. Natl. Acad. Sci. U.S.A. 114: E9483–E9492. doi: 10.1073/pnas.1706277114
  60. Zhou, Y., B. Conway, D. Miller, D. Marshall, A. Cooper, P. Murphy, S. Chao, G. Brown-Guedira and J. Costa. Quantitative trait loci mapping for spike characteristics in hexaploid wheat. Plant Genome. 10. doi:10.3835/plantgenome2016.10.0101